SOM cluster: 1314

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 170
Promoter: 61%
CpG-Island: 89%
Conserved: 86%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 98/100 | e-val: 0
Factore-val(match)DB
SP10.0000029733JASPAR
Egr10.00035226JASPAR
TFAP2A0.0017305JASPAR
Klf40.0029072JASPAR
PLAG10.016419JASPAR
Sites: 83/100 | e-val: 0
Factore-val(match)DB
SP10.00018072JASPAR
TFAP2A0.00068968JASPAR
PLAG10.004218JASPAR
Egr10.018622JASPAR
RREB10.040998JASPAR
Sites: 58/100 | e-val: 0.0000000049
Factore-val(match)DB
SP10.0000001662JASPAR
Klf40.00079495JASPAR
Egr10.0011515JASPAR
PLAG10.01028JASPAR
ELK40.034853JASPAR

BED file downloads

Download top of 170 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 184080300-184080450POLR2H39.98
chr3: 184080300-184080450FAM131A39.98
chr12: 109124380-109124530CORO1C43.21
chr3: 159481640-159481790IQCJ-SCHIP144.33
chr2: 102003800-102003950AC092570.250.56
chr11: 123525320-123525470SCN3B51.16
chr11: 123525320-123525470ZNF20251.16
chr1: 204121260-204121410ETNK251.55
chr17: 74379245-74379395SPHK152.71
chr17: 74379245-74379395QRICH252.71
View top connections.

Other

CodePlot