SOM cluster: 132

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 219
Promoter: 60%
CpG-Island: 89%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.000000027347JASPAR
PLAG10.00031294JASPAR
Klf40.0018224JASPAR
TFAP2A0.0060666JASPAR
Egr10.018015JASPAR
Sites: 65/100 | e-val: 0.2
Factore-val(match)DB
TFAP2A0.0000057981JASPAR
SP10.0068465JASPAR
Klf40.0088992JASPAR
E2F10.014535JASPAR
NHLH10.044134JASPAR
Sites: 47/100 | e-val: 1.2
Factore-val(match)DB
E2F10.003025JASPAR
Egr10.0039562JASPAR
INSM10.02244JASPAR
REST0.024754JASPAR
TEAD10.026328JASPAR

BED file downloads

Download top of 219 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 18548120-18548270LDHAL6A46.49
chr1: 168148420-168148570GPR16146.6
chr19: 9732060-9732210ZNF12147.73
chr17: 76374620-76374770SOCS354.53
chr2: 153032140-153032290CACNB457.61
chrX: 100872940-100873090RP3-514P16.158.5
chr8: 124286720-124286870ATAD259.66
chr6: 32122420-32122570AGER62.96
chr6: 32122420-32122570TNXB62.96
chr6: 32122420-32122570PBX262.96
View top connections.

Other

CodePlot