SOM cluster: 1330

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3109
Promoter: 0%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.014
Factore-val(match)DB
MEF2A0.0018771JASPAR
HNF1B0.0033893JASPAR
Lhx30.004229JASPAR
HNF1A0.0052272JASPAR
Foxq10.0087007JASPAR

BED file downloads

Download top of 3109 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146703860-146704010RP11-337C18.413.2
chr1: 146703860-146704010PDIA3P113.2
chr11: 16118000-16118150SOX633.61
chr12: 112808100-112808250RPL634.17
chr1: 178055500-178055650RP11-568K15.136.61
chr10: 29169140-29169290RNA5SP30838.38
chr10: 29169140-29169290LINC0083738.38
chr11: 131922920-131923070RP11-697E14.238.52
chr3: 127544700-127544850MGLL39.19
chr2: 128164065-128164215AC068282.339.89
View top connections.

Other

CodePlot