SOM cluster: 1331

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2011
Promoter: 0%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 2.3e-22
Factore-val(match)DB
HNF1A0.00027197JASPAR
HNF1B0.0003907JASPAR
Pax40.00041663JASPAR
ARID3A0.0014136JASPAR
Lhx30.0046106JASPAR
Sites: 19/100 | e-val: 0.0069
Factore-val(match)DB
Foxd30.0000025873JASPAR
MEF2A0.00030555JASPAR
Foxq10.00038475JASPAR
Foxa20.0015897JASPAR
ARID3A0.0041322JASPAR
Sites: 15/100 | e-val: 0.91
Factore-val(match)DB
Pax40.0003731JASPAR
HNF1A0.00068918JASPAR
Lhx30.0027834JASPAR
MEF2A0.0036532JASPAR
HNF1B0.0045366JASPAR

BED file downloads

Download top of 2011 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 36566180-36566330STAC31.85
chr7: 106355340-106355490CCDC71L33.67
chr7: 106355340-106355490AC004917.133.67
chr1: 161691605-161691755FCRLB37.47
chr13: 98855845-98855995FARP141.22
chr1: 198071260-198071410NEK741.33
chr12: 25983220-25983370RP11-443N24.142.34
chr1: 115855600-115855750NGF43.42
chr8: 74031040-74031190SBSPON44.84
chr5: 152932600-152932750GRIA146.05
View top connections.

Other

CodePlot