SOM cluster: 1339

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 178
Promoter: 0%
CpG-Island: 0%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 1.5
Factore-val(match)DB
Foxd30.000053747JASPAR
Foxq10.00090507JASPAR
FOXI10.00206JASPAR
HNF1B0.003833JASPAR
MEF2A0.0050156JASPAR
Sites: 34/100 | e-val: 0.0000000023
Factore-val(match)DB
AP10.000000000018647JASPAR
NFE2L20.000000081709JASPAR
PBX10.0015585JASPAR
PPARG0.0067927JASPAR
Gfi0.015374JASPAR

BED file downloads

Download top of 178 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 131750240-131750390PHYHD147.5
chr9: 131750240-131750390NUP18847.5
chr9: 131750240-131750390DOLPP147.5
chr13: 21255740-21255890XPO452.21
chr1: 198546740-198546890PTPRC52.66
chr1: 198546740-198546890ATP6V1G352.66
chr1: 198546740-198546890RP11-553K8.252.66
chr4: 148947420-148947570ARHGAP1053.11
chr5: 86441780-86441930RP11-72L22.154.95
chr11: 123043925-123044075CLMP56.98
View top connections.

Other

CodePlot