SOM cluster: 1342

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 269
Promoter: 1%
CpG-Island: 0%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.00005
Factore-val(match)DB
Foxd30.000000016259JASPAR
Foxq10.0000042161JASPAR
FOXA10.000016259JASPAR
Foxa20.000018521JASPAR
HNF1B0.000061033JASPAR
Sites: 55/100 | e-val: 0.0000000061
Factore-val(match)DB
CEBPA0.000001417JASPAR
NFIL30.00056554JASPAR
HLF0.002088JASPAR
Pou5f10.010317JASPAR
T0.017772JASPAR

BED file downloads

Download top of 269 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 122736560-122736710HAS2-AS137.86
chr8: 122736560-122736710HAS237.86
chr8: 8537860-8538010CLDN2342.98
chr8: 8537860-8538010AC087269.142.98
chr12: 88641120-88641270TMTC343.72
chr2: 39732100-39732250AC007246.351.68
chr7: 46425720-46425870AC004869.353.68
chr7: 46425720-46425870AC004869.253.68
chr11: 66703785-66703935PC54.4
chr11: 66703785-66703935C11orf8054.4
View top connections.

Other

CodePlot