SOM cluster: 1343

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 198
Promoter: 5%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 2.9e-19
Factore-val(match)DB
AP10.000000000019826JASPAR
NFE2L20.0000000056885JASPAR
PPARG0.0036546JASPAR
NFE2L1::MafG0.0054756JASPAR
Foxa20.012349JASPAR
Sites: 53/100 | e-val: 8.2e-19
Factore-val(match)DB
CEBPA0.0000000021936JASPAR
HLF0.00032617JASPAR
Ddit3::Cebpa0.00092089JASPAR
NFIL30.0033682JASPAR
NFATC20.0073751JASPAR

BED file downloads

Download top of 198 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 56612320-56612470HSF545.13
chr17: 56612320-56612470MTMR445.13
chr9: 132536020-132536170AL590369.148.61
chr9: 132536020-132536170PTGES48.61
chr12: 6441740-6441890LTBR57.76
chr12: 6441740-6441890TNFRSF1A57.76
chr6: 35694240-35694390FKBP559.15
chr12: 93638060-93638210snoU1360.03
chr8: 134143180-134143330WISP161.74
chr14: 31698885-31699035RP11-596D21.161.78
View top connections.

Other

CodePlot