SOM cluster: 1344

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 314
Promoter: 1%
CpG-Island: 0%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000000000026
Factore-val(match)DB
AP10.0000000060061JASPAR
NFE2L20.00000003501JASPAR
NFE2L1::MafG0.00010236JASPAR
PBX10.013998JASPAR
Pax20.032704JASPAR

BED file downloads

Download top of 314 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 183204200-183204350LAMC136.94
chr1: 183204200-183204350RP11-548N1.136.94
chr3: 46169140-46169290CCR146.6
chr1: 51730260-51730410RNF1148.35
chr1: 51730260-51730410snoU1348.35
chr1: 51730260-51730410TTC39A48.35
chr7: 55154120-55154270EGFR-AS149.37
chr7: 55154120-55154270EGFR49.37
chr6: 161856000-161856150PARK253.86
chr8: 18611320-18611470RPL35P654.23
View top connections.

Other

CodePlot