SOM cluster: 1383

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 343
Promoter: 2%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
Foxq10.0042361JASPAR
MEF2A0.0078427JASPAR
HNF1A0.0080808JASPAR
Foxd30.0082409JASPAR
HNF1B0.010934JASPAR
Sites: 47/100 | e-val: 0.000000034
Factore-val(match)DB
Foxq10.0013784JASPAR
HNF1A0.0054118JASPAR
Foxd30.0080117JASPAR
HNF1B0.0091579JASPAR
Pax40.017497JASPAR
Sites: 31/100 | e-val: 0.69
Factore-val(match)DB
Foxd30.000014214JASPAR
ARID3A0.0014722JASPAR
Foxq10.0043759JASPAR
Lhx30.011679JASPAR
Nkx2-50.023595JASPAR

BED file downloads

Download top of 343 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 72703800-72703950BTF358.47
chr5: 72703800-72703950RP11-79P5.258.47
chr8: 36758520-36758670AC090453.161.5
chr4: 100155820-100155970RP11-696N14.166.62
chr3: 42786940-42787090ZBTB4770.36
chr22: 45851200-45851350FBLN174.56
chr3: 24555100-24555250THRB-IT174.68
chr17: 67946260-67946410AC002539.177.13
chr12: 125240860-125241010SCARB180.37
chr4: 39546300-39546450LIAS82.41
View top connections.

Other

CodePlot