SOM cluster: 140

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 150
Promoter: 55%
CpG-Island: 60%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 1.7e-26
Factore-val(match)DB
SP10.00034421JASPAR
Klf40.0078062JASPAR
TFAP2A0.016957JASPAR
Egr10.029093JASPAR
Zfx0.030524JASPAR
Sites: 47/100 | e-val: 0.00097
Factore-val(match)DB
SP10.000011355JASPAR
PLAG10.00082696JASPAR
SPIB0.016635JASPAR
MZF1_1-40.020669JASPAR
E2F10.022306JASPAR

BED file downloads

Download top of 150 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 91966840-91966990CDC76.72
chr1: 92545960-92546110BRDT12.57
chr1: 92545960-92546110EPHX412.57
chr1: 92545960-92546110GAPDHP4612.57
chr1: 150206940-150207090ANP32E12.95
chr1: 150206940-150207090C1orf5112.95
chr1: 150206940-150207090PRPF312.95
chr1: 150206940-150207090C1orf5412.95
chr6: 28303660-28303810RP5-874C20.326.36
chr6: 28303660-28303810PGBD126.36
View top connections.

Other

CodePlot