SOM cluster: 1404

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1596
Promoter: 26%
CpG-Island: 87%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.000037313JASPAR
SP10.00036066JASPAR
Klf40.0012194JASPAR
Zfx0.0033069JASPAR
RREB10.011379JASPAR
Sites: 83/100 | e-val: 0.0000021
Factore-val(match)DB
SP10.000000072096JASPAR
PLAG10.00007235JASPAR
TFAP2A0.0065798JASPAR
Klf40.0081218JASPAR
MZF1_1-40.018339JASPAR

BED file downloads

Download top of 1596 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92350825-92350975TGFBR35.29
chr1: 150207440-150207590C1orf5413.25
chr12: 27933945-27934095MRPS3530.74
chr11: 11642285-11642435GALNT1833.53
chr22: 39052120-39052270RP3-508I15.1435.89
chr11: 13689565-13689715HMGN2P3636.78
chr12: 90101725-90101875MRPL2P137.77
chr22: 38711140-38711290RP1-5O6.539.74
chr9: 130797300-130797450RP11-203J24.839.85
chr1: 90309680-90309830RP5-943J3.140.42
View top connections.

Other

CodePlot