SOM cluster: 1421

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1043
Promoter: 0%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.0000000064
Factore-val(match)DB
HNF1B0.00072519JASPAR
ARID3A0.0015639JASPAR
MEF2A0.0060912JASPAR
NKX3-10.010596JASPAR
Foxq10.012408JASPAR

BED file downloads

Download top of 1043 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 97659520-97659670CPQ36.07
chr8: 97659520-97659670SDC236.07
chr15: 39959160-39959310CTD-2033D15.139.82
chr15: 39959160-39959310THBS139.82
chr15: 39959160-39959310FSIP139.82
chr17: 76654745-76654895CYTH144.48
chr17: 76654745-76654895DNAH1744.48
chr17: 10446860-10447010MYH347.67
chr17: 10446860-10447010MYH247.67
chr9: 113475360-113475510MUSK47.74
View top connections.

Other

CodePlot