SOM cluster: 143

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 116
Promoter: 22%
CpG-Island: 70%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.000000037162JASPAR
TFAP2A0.00071295JASPAR
RREB10.0047052JASPAR
CTCF0.009054JASPAR
Pax40.011552JASPAR
Sites: 53/100 | e-val: 3.8e-18
Factore-val(match)DB
Klf40.00000000073929JASPAR
SP10.000000082631JASPAR
Zfx0.00022949JASPAR
TFAP2A0.00063683JASPAR
Egr10.0095579JASPAR
Sites: 57/100 | e-val: 0.000028
Factore-val(match)DB
CTCF0.0000000007995JASPAR
INSM10.00000028802JASPAR
SP10.00012491JASPAR
TFAP2A0.0078732JASPAR
PLAG10.01413JASPAR

BED file downloads

Download top of 116 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr22: 39784320-39784470MGAT340.28
chr17: 27942620-27942770TAOK155.17
chr22: 42896460-42896610RN7SKP8059.08
chr19: 17623040-17623190COLGALT164.81
chr17: 18057260-18057410ALKBH571.74
chr1: 976245-976395RP11-465B22.571.95
chr1: 976245-976395SAMD1171.95
chr4: 186130600-186130750KIAA143071.96
chr19: 12606160-12606310ZNF79972.38
chr19: 12606160-12606310CTD-3105H18.772.38
View top connections.

Other

CodePlot