SOM cluster: 1432

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 260
Promoter: 0%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.000000017
Factore-val(match)DB
HNF1B0.000014023JASPAR
MEF2A0.00022815JASPAR
NKX3-10.00046265JASPAR
ARID3A0.00052966JASPAR
Foxd30.0007749JASPAR
Sites: 19/100 | e-val: 0.00044
Factore-val(match)DB
NR3C10.00060693JASPAR
HNF1B0.00076374JASPAR
Foxd30.0014102JASPAR
FOXF20.0082372JASPAR
Lhx30.019511JASPAR

BED file downloads

Download top of 260 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr14: 32869820-32869970AKAP647.9
chr8: 69672600-69672750C8orf3453.2
chr17: 76654560-76654710DNAH1756
chr17: 76654560-76654710CYTH156
chr13: 32329905-32330055EEF1DP358.84
chr6: 17278620-17278770RBM2462.31
chr17: 28852060-28852210GOSR165.62
chr4: 129305260-129305410PGRMC266.59
chr7: 134375980-134376130CALD167.82
chr2: 40355400-40355550SLC8A168.3
View top connections.

Other

CodePlot