SOM cluster: 146

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 431
Promoter: 91%
CpG-Island: 93%
Conserved: 90%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 97/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00055487JASPAR
SP10.00066266JASPAR
Egr10.012802JASPAR
PLAG10.030134JASPAR
NHLH10.059136JASPAR
Sites: 93/100 | e-val: 0
Factore-val(match)DB
SP10.00000065883JASPAR
PLAG10.01475JASPAR
TFAP2A0.015623JASPAR
Klf40.026161JASPAR
INSM10.030823JASPAR
Sites: 86/100 | e-val: 0.0000000013
Factore-val(match)DB
SP10.00000000027879JASPAR
Klf40.0000069463JASPAR
Egr10.00005579JASPAR
TFAP2A0.00088541JASPAR
TLX1::NFIC0.020788JASPAR

BED file downloads

Download top of 431 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 95961620-95961770CCNE240.4
chr8: 95961620-95961770TP53INP140.4
chr8: 41909680-41909830RP11-589C21.242.62
chr1: 54411900-54412050LDLRAD161.81
chr16: 30538100-30538250Y_RNA61.97
chr4: 83350620-83350770IGBP1P463.58
chr16: 838500-838650MSLN64.18
chr16: 838500-838650METRN64.18
chr17: 77005820-77005970LGALS3BP64.91
chr17: 77005820-77005970CANT164.91
View top connections.

Other

CodePlot