SOM cluster: 1490

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 140
Promoter: 2%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.66
Factore-val(match)DB
Lhx30.000005792JASPAR
NFE2L20.000082154JASPAR
AP10.00013JASPAR
HNF1A0.00021702JASPAR
NFE2L1::MafG0.00056242JASPAR

BED file downloads

Download top of 140 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92018780-92018930HSP90B3P3.85
chr12: 27780180-27780330RP11-1060J15.549.12
chr17: 13324340-13324490HS3ST3A150.2
chr6: 20907320-20907470CDKAL156.84
chr6: 117763160-117763310DCBLD158.37
chr4: 74587300-74587450RN7SL492P59.19
chr17: 38529680-38529830CDC663.21
chr17: 38529680-38529830TOP2A63.21
chr4: 54489160-54489310FIP1L163.38
chr17: 6830740-6830890BCL6B64.68
View top connections.

Other

CodePlot