SOM cluster: 1493

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 208
Promoter: 6%
CpG-Island: 0%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.67
Factore-val(match)DB
EWSR1-FLI10.00084296JASPAR
FOXF20.0050591JASPAR
Evi10.0064594JASPAR
Foxq10.016715JASPAR
Foxd30.017943JASPAR
Sites: 19/100 | e-val: 0.00069
Factore-val(match)DB
NFIC0.0011217JASPAR
NFATC20.0016462JASPAR
E2F10.003444JASPAR
CEBPA0.014683JASPAR
EBF10.034448JASPAR

BED file downloads

Download top of 208 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 89896240-89896390STEAP256.38
chr4: 100123820-100123970ADH657.62
chr4: 100123820-100123970ADH1A57.62
chr2: 127913580-127913730CYP27C161.24
chr2: 127913580-127913730BIN161.24
chr10: 75799640-75799790AP3M165.3
chr14: 23318480-23318630SNORD4165.35
chr14: 23318480-23318630CTD-2555K7.265.35
chr14: 23318480-23318630MMP1465.35
chr14: 23318480-23318630LRP1065.35
View top connections.

Other

CodePlot