SOM cluster: 1520

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4246
Promoter: 5%
CpG-Island: 1%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
Myf0.000000010518JASPAR
NHLH10.0000059682JASPAR
REST0.00063398JASPAR
Myb0.00088301JASPAR
Tal1::Gata10.0014462JASPAR
Sites: 77/100 | e-val: 3.3e-30
Factore-val(match)DB
SP10.0000013804JASPAR
INSM10.00017232JASPAR
RREB10.0014638JASPAR
PPARG::RXRA0.0032835JASPAR
RXR::RAR_DR50.0048622JASPAR
Sites: 25/100 | e-val: 0.029
Factore-val(match)DB
Myf0.00000000021594JASPAR
NHLH10.00000062429JASPAR
TAL1::TCF30.0022244JASPAR
CTCF0.0027494JASPAR
Myb0.0079843JASPAR

BED file downloads

Download top of 4246 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 131467700-131467850ZDHHC1235.41
chr22: 19716520-19716670GNB1L40.73
chr5: 179604605-179604755RASGEF1C41.81
chr9: 138923680-138923830UBAC143.3
chr8: 144488385-144488535RP11-909N17.344.73
chr19: 49492920-49493070BAX45.85
chr22: 36829080-36829230Y_RNA45.88
chr8: 144484820-144484970ZC3H345.91
chr1: 203005500-203005650PPFIA446.51
chr13: 32596580-32596730FRY47.47
View top connections.

Other

CodePlot