SOM cluster: 1561

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 145
Promoter: 7%
CpG-Island: 1%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.0000000000041
Factore-val(match)DB
SP10.000000001538JASPAR
Pax40.00000067877JASPAR
Tal1::Gata10.00048432JASPAR
Klf40.0022642JASPAR
RREB10.0036601JASPAR
Sites: 35/100 | e-val: 0.0000000076
Factore-val(match)DB
PLAG10.0050843JASPAR
Egr10.0066202JASPAR
ESR10.0089086JASPAR
Zfx0.0091639JASPAR
TFAP2A0.014554JASPAR

BED file downloads

Download top of 145 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 148929080-148929230DRD5P213.02
chr1: 148929080-148929230RP11-14N7.213.02
chr9: 130485920-130486070ENG48.52
chr9: 130485920-130486070RP11-228B15.448.52
chr9: 130485920-130486070STXBP148.52
chr9: 130485920-130486070FPGS48.52
chr9: 130485920-130486070SH2D3C48.52
chr9: 130485920-130486070C9orf11748.52
chr11: 12548500-12548650PARVA58.05
chr11: 2333640-2333790CD8162.22
View top connections.

Other

CodePlot