SOM cluster: 1617

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 226
Promoter: 3%
CpG-Island: 0%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 4.9e-23
Factore-val(match)DB
NHLH10.000048491JASPAR
Myf0.00048344JASPAR
Myb0.015407JASPAR
TAL1::TCF30.022052JASPAR
REST0.035284JASPAR
Sites: 14/100 | e-val: 0.93
Factore-val(match)DB
RREB10.00011236JASPAR
Tal1::Gata10.00035849JASPAR
Klf40.00078543JASPAR
T0.00080545JASPAR
ZNF354C0.006788JASPAR

BED file downloads

Download top of 226 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 15688980-15689130RP11-396O20.230.06
chr11: 15688980-15689130RP11-531H8.230.06
chr4: 124510160-124510310LINC0109138.6
chr8: 42709860-42710010HOOK360.18
chr6: 132109580-132109730RN7SKP24563.45
chr6: 132109580-132109730RP3-323K23.363.45
chr6: 132109580-132109730ENPP163.45
chr1: 218558160-218558310TGFB264.42
chr13: 110985240-110985390COL4A165.84
chr13: 110985240-110985390COL4A265.84
View top connections.

Other

CodePlot