SOM cluster: 1635

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 176
Promoter: 3%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.000000004
Factore-val(match)DB
NFE2L20.000000022574JASPAR
AP10.0000017618JASPAR
NKX3-10.00029201JASPAR
Pdx10.0015991JASPAR
HOXA50.0053197JASPAR
Sites: 14/100 | e-val: 0.55
Factore-val(match)DB
IRF20.0000028696JASPAR
IRF10.000059891JASPAR
FOXO30.00019016JASPAR
SPIB0.00025256JASPAR
NFATC20.00030453JASPAR

BED file downloads

Download top of 176 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 133895360-133895510FIBCD139.99
chr3: 135787660-135787810PPP2R3A54.36
chr1: 66899940-66900090SGIP163.38
chr2: 230205240-230205390PID163.95
chr20: 39847260-39847410ZHX364.11
chr20: 39847260-39847410TOP164.11
chr20: 39847260-39847410RP1-1J6.264.11
chr18: 21108680-21108830ANKRD2964.67
chr3: 37276580-37276730LRRFIP265.89
chr8: 13219620-13219770DLC167.38
View top connections.

Other

CodePlot