SOM cluster: 1660

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 180
Promoter: 1%
CpG-Island: 2%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.0000000000000046
Factore-val(match)DB
Foxd30.0000029678JASPAR
Foxq10.00038151JASPAR
FOXI10.0026504JASPAR
Lhx30.0080512JASPAR
ARID3A0.012211JASPAR
Sites: 24/100 | e-val: 0.036
Factore-val(match)DB
MEF2A0.000039602JASPAR
Foxd30.00084137JASPAR
NKX3-10.012885JASPAR
FOXI10.016875JASPAR
Sox20.018595JASPAR

BED file downloads

Download top of 180 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 1123460-1123610MIR42929.85
chr1: 1123460-1123610SDF429.85
chr1: 1123460-1123610C1orf15929.85
chr9: 116935540-116935690COL27A154.92
chr11: 128733180-128733330KCNJ556.92
chr4: 169679905-169680055PALLD59.5
chr4: 169679905-169680055RPL9P1659.5
chr8: 82470385-82470535FTH1P1159.65
chr8: 123828500-123828650RP11-44N11.161.13
chr22: 19866580-19866730COMT62.72
View top connections.

Other

CodePlot