SOM cluster: 1662

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 317
Promoter: 3%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 62/100 | e-val: 1.8e-25
Factore-val(match)DB
Lhx30.00057315JASPAR
ARID3A0.0018878JASPAR
NFATC20.0025032JASPAR
Prrx20.0029467JASPAR
Foxd30.0032354JASPAR
Sites: 41/100 | e-val: 0.000011
Factore-val(match)DB
znf1430.0012049JASPAR
SOX100.0040987JASPAR
SRY0.0048462JASPAR
SOX90.0056782JASPAR
Lhx30.0079282JASPAR

BED file downloads

Download top of 317 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 149321580-149321730WWTR142.1
chr3: 149321580-149321730WWTR1-AS142.1
chr12: 76418640-76418790RP11-290L1.256.07
chr12: 76418640-76418790PHLDA156.07
chr12: 76418640-76418790NAP1L156.07
chr3: 185378560-185378710C3orf6557.24
chr3: 185378560-185378710IGF2BP257.24
chr14: 29046865-29047015EIF4A1P1259.81
chr6: 14001440-14001590RNF18261
chr3: 124598320-124598470ENO1P363.79
View top connections.

Other

CodePlot