SOM cluster: 1665

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 63
Promoter: 0%
CpG-Island: 1%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/63 | e-val: 2.2e-18
Factore-val(match)DB
SOX100.0000016837JASPAR
SOX90.0000083396JASPAR
Sox50.00036573JASPAR
Sox20.0023998JASPAR
SRY0.0042316JASPAR
Sites: 9/63 | e-val: 0.71
Factore-val(match)DB
SP10.0000046113JASPAR
RREB10.000004797JASPAR
Pax40.000011787JASPAR
EWSR1-FLI10.000028791JASPAR
PPARG::RXRA0.0066008JASPAR

BED file downloads

Download top of 63 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 112538920-112539070MCC53.19
chr9: 37964140-37964290PAICSP157.03
chr9: 37964140-37964290RP11-613M10.957.03
chr9: 37964140-37964290SHB57.03
chr9: 37964140-37964290SLC25A5157.03
chr4: 10047220-10047370SLC2A964.62
chr4: 10047220-10047370WDR164.62
chr11: 94882800-94882950ENDOD168.99
chr11: 94882800-94882950SRSF868.99
chr17: 70611180-70611330LINC0051172.29
View top connections.

Other

CodePlot