SOM cluster: 1679

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 224
Promoter: 4%
CpG-Island: 0%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 1.9
Factore-val(match)DB
ARID3A0.00025762JASPAR
Lhx30.00048987JASPAR
AP10.0006422JASPAR
HNF1B0.00071647JASPAR
Foxq10.0016983JASPAR

BED file downloads

Download top of 224 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204462660-204462810RP11-430C7.232.45
chr1: 203432140-203432290PRELP36.59
chr2: 55173060-55173210RTN441.78
chr9: 133669960-133670110ABL143.22
chr12: 7167585-7167735C1S51.28
chr12: 7167585-7167735EMG151.28
chr12: 7167585-7167735C1RL-AS151.28
chr12: 7167585-7167735C1RL51.28
chr12: 7167585-7167735PHB251.28
chr12: 7167585-7167735C1R51.28
View top connections.

Other

CodePlot