SOM cluster: 170

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 171
Promoter: 38%
CpG-Island: 51%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 4.5e-37
Factore-val(match)DB
SP10.0001407JASPAR
Klf40.0011781JASPAR
RREB10.0017879JASPAR
Egr10.005823JASPAR
Pax40.011474JASPAR
Sites: 39/100 | e-val: 0.000025
Factore-val(match)DB
SP10.00000028046JASPAR
Pax40.00025529JASPAR
PLAG10.00038192JASPAR
INSM10.0040681JASPAR
EWSR1-FLI10.004951JASPAR

BED file downloads

Download top of 171 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 31609260-31609410RP11-192P3.542.18
chr10: 31609260-31609410ZEB1-AS142.18
chr10: 88160620-88160770WAPAL46.48
chr16: 89002520-89002670TRAPPC2L48.74
chr16: 89002520-89002670CBFA2T348.74
chr9: 92112125-92112275SEMA4D54.65
chr11: 119185905-119186055C1QTNF559.93
chr11: 119185905-119186055MFRP59.93
chr11: 119185905-119186055CBL59.93
chr19: 12978180-12978330GCDH61.58
View top connections.

Other

CodePlot