SOM cluster: 1708

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 234
Promoter: 1%
CpG-Island: 0%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.0000000001
Factore-val(match)DB
AP10.00000021489JASPAR
Lhx30.000019744JASPAR
HNF1A0.000063346JASPAR
NFE2L20.00015292JASPAR
NKX3-10.0024477JASPAR
Sites: 41/100 | e-val: 1.2
Factore-val(match)DB
Foxq10.00030477JASPAR
HNF1B0.00062784JASPAR
Foxd30.0010306JASPAR
NKX3-10.0015815JASPAR
HNF1A0.010585JASPAR

BED file downloads

Download top of 234 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 27925680-27925830RP11-1060J15.444.63
chr12: 27925680-27925830Y_RNA44.63
chr8: 38896220-38896370SNORD3848.53
chr5: 148940925-148941075CSNK1A149.63
chr5: 148940925-148941075CTB-89H12.449.63
chr3: 57695380-57695530DENND6A53.54
chr8: 87114920-87115070PSKH261.02
chr7: 43626080-43626230STK17A61.24
chr7: 43626080-43626230HECW161.24
chr1: 214650180-214650330PTPN1464.43
View top connections.

Other

CodePlot