SOM cluster: 1744

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 235
Promoter: 0%
CpG-Island: 0%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 4.3e-20
Factore-val(match)DB
CEBPA0.0000027734JASPAR
NFIL30.012125JASPAR
Ddit3::Cebpa0.019444JASPAR
HLF0.021621JASPAR
Pou5f10.021989JASPAR
Sites: 25/100 | e-val: 0.0014
Factore-val(match)DB
HNF1A0.0001829JASPAR
NKX3-10.0016712JASPAR
HNF1B0.0052402JASPAR
NFATC20.005869JASPAR
FOXO30.023728JASPAR

BED file downloads

Download top of 235 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 7314500-7314650C1RL44.83
chr12: 7314500-7314650C1R44.83
chr12: 7314500-7314650C1RL-AS144.83
chr2: 39696240-39696390AC007246.345.1
chr5: 143519320-143519470RN7SL87P50.89
chr5: 143519320-143519470YIPF550.89
chr5: 143519320-143519470KCTD1650.89
chr12: 91619200-91619350DCN54.53
chr7: 39920260-39920410AC004987.955.28
chr7: 39920260-39920410CDK1355.28
View top connections.

Other

CodePlot