SOM cluster: 1758

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4726
Promoter: 8%
CpG-Island: 4%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 1.8
Factore-val(match)DB
Foxd30.00000018308JASPAR
Foxq10.000013741JASPAR
Pax40.00002086JASPAR
FOXI10.00008859JASPAR
FOXA10.00014287JASPAR

BED file downloads

Download top of 4726 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146715760-146715910RP11-337C18.413.02
chr1: 147807580-147807730RP11-495P10.813.02
chr1: 150544640-150544790MCL125.05
chr1: 150544640-150544790LINC0056825.05
chr1: 150780300-150780450HORMAD128.76
chr18: 42261485-42261635SETBP130.58
chr8: 20192960-20193110LZTS131.06
chr8: 20192960-20193110RP11-563N12.231.06
chr8: 20192960-20193110LZTS1-AS131.06
chr12: 6650185-6650335GAPDH38.04
View top connections.

Other

CodePlot