SOM cluster: 1761

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 204
Promoter: 3%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.2e-30
Factore-val(match)DB
AP10.00000000082076JASPAR
NFE2L20.0000000016505JASPAR
NFE2L1::MafG0.00010064JASPAR
PBX10.008851JASPAR
Pax20.0091658JASPAR
Sites: 47/100 | e-val: 0.0000000000036
Factore-val(match)DB
Foxd30.00021267JASPAR
ARID3A0.00078609JASPAR
FOXA10.00085013JASPAR
SPIB0.0039734JASPAR
Foxa20.0040452JASPAR

BED file downloads

Download top of 204 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 112124660-112124810IFRD143.35
chr7: 112124660-112124810NPM1P1443.35
chr1: 171708900-171709050VAMP443.8
chrX: 9879680-9879830SHROOM247.07
chrX: 9879680-9879830AC002365.147.07
chr8: 124115900-124116050RP11-557C18.349.86
chr12: 24770520-24770670RP11-444D3.152.14
chr2: 109210340-109210490LIMS154.47
chr2: 109210340-109210490AC010095.554.47
chr3: 190284060-190284210GCNT1P360.44
View top connections.

Other

CodePlot