SOM cluster: 1784

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 232
Promoter: 1%
CpG-Island: 0%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 3.4e-20
Factore-val(match)DB
Pax40.00065544JASPAR
MEF2A0.0015861JASPAR
Foxa20.003573JASPAR
Foxd30.0036911JASPAR
Lhx30.0039335JASPAR
Sites: 30/100 | e-val: 0.0000015
Factore-val(match)DB
FEV0.00000031022JASPAR
SPIB0.000020186JASPAR
Stat30.00025357JASPAR
ELK40.0010572JASPAR
NFATC20.0011JASPAR
Sites: 45/100 | e-val: 0.000004
Factore-val(match)DB
AP10.0000000012148JASPAR
NFE2L20.0000000070874JASPAR
NFE2L1::MafG0.0047323JASPAR
PPARG0.0090914JASPAR
PBX10.014266JASPAR
Sites: 19/100 | e-val: 0.00089
Factore-val(match)DB
Pou5f10.018709JASPAR
RORA_10.019934JASPAR
NFE2L20.024276JASPAR
Lhx30.024902JASPAR
Sox20.032759JASPAR

BED file downloads

Download top of 232 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 99444300-99444450TSPAN537.19
chr7: 107863060-107863210NRCAM38.25
chr12: 27934200-27934350RN7SKP1538.67
chr12: 27934200-27934350Y_RNA38.67
chr12: 27934200-27934350KLHL4238.67
chr12: 27934200-27934350PPFIBP138.67
chr17: 62737400-62737550SMURF245.69
chr2: 182670060-182670210SSFA246.51
chr3: 37137880-37138030LRRFIP249.02
chr3: 156207260-156207410KCNAB149.25
View top connections.

Other

CodePlot