SOM cluster: 1796

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3167
Promoter: 0%
CpG-Island: 0%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 3.2e-23
Factore-val(match)DB
Lhx30.00000036332JASPAR
ARID3A0.0000076913JASPAR
HNF1A0.000046134JASPAR
TAL1::TCF30.000062139JASPAR
Prrx20.000095455JASPAR
Sites: 20/100 | e-val: 0.028
Factore-val(match)DB
Foxd30.000035049JASPAR
MEF2A0.000055212JASPAR
Foxq10.0044402JASPAR
CEBPA0.0046835JASPAR
FOXI10.0048635JASPAR

BED file downloads

Download top of 3167 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 91942780-91942930RP11-47K11.227.18
chr5: 115195220-115195370AP3S138.85
chr5: 115195220-115195370ATG1238.85
chr8: 123832200-123832350AC016405.140
chr8: 98305305-98305455U341.91
chr8: 98305305-98305455TSPYL541.91
chr1: 92219520-92219670TGFBR342.17
chr10: 7604140-7604290ITIH542.59
chr17: 66636860-66637010FAM20A43.51
chr8: 102156160-102156310KB-1460A1.144.7
View top connections.

Other

CodePlot