SOM cluster: 1820

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 23329
Promoter: 0%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 52/100 | e-val: 7.6e-20
Factore-val(match)DB
HNF1B0.00029444JASPAR
Lhx30.00050064JASPAR
HNF1A0.0012923JASPAR
ARID3A0.0024996JASPAR
MEF2A0.0079686JASPAR

BED file downloads

Download top of 23329 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 115054740-115054890AC010226.435.02
chr1: 147146860-147147010ACP635.96
chr8: 52392600-52392750PXDNL39.36
chr9: 38662100-38662250RP13-198D9.339.61
chr8: 56115200-56115350RP11-386G21.241.81
chr8: 56115200-56115350XKR441.81
chr3: 38221720-38221870SLC22A1342.51
chr1: 215959860-215960010RP5-1111A8.346.01
chrX: 109498480-109498630TMEM16446.78
chr1: 95395280-95395430RP4-639F20.147.1
View top connections.

Other

CodePlot