SOM cluster: 1836

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 440
Promoter: 1%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.0000000071
Factore-val(match)DB
FOXI10.000000000038343JASPAR
Foxq10.00000000029285JASPAR
Foxd30.0000000058677JASPAR
Foxa20.000000021649JASPAR
FOXA10.00000028136JASPAR
Sites: 21/100 | e-val: 0.2
Factore-val(match)DB
AP10.0000006552JASPAR
NFE2L20.0033378JASPAR
ARID3A0.0036332JASPAR
HNF1B0.0066069JASPAR
Prrx20.046977JASPAR

BED file downloads

Download top of 440 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 15738260-15738410RP11-396O20.244.95
chr17: 70096160-70096310SOX947.65
chr2: 75474020-75474170TACR149.09
chr6: 34181660-34181810RP11-513I15.652.92
chr20: 49269480-49269630RP4-530I15.655.64
chr2: 153481420-153481570ARL6IP658.09
chr13: 32709780-32709930FRY59.69
chr1: 178619200-178619350RALGPS261.38
chr1: 178619200-178619350PTPN2P161.38
chr2: 208119825-208119975AC007879.361.38
View top connections.

Other

CodePlot