SOM cluster: 1842

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 281
Promoter: 2%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.016
Factore-val(match)DB
Lhx30.000042937JASPAR
Prrx20.00031828JASPAR
HNF1B0.0010467JASPAR
ARID3A0.0014911JASPAR
HNF1A0.0034751JASPAR
Sites: 22/100 | e-val: 0.000052
Factore-val(match)DB
AP10.000000016048JASPAR
NFE2L20.0000051112JASPAR
HOXA50.0049828JASPAR
Pax60.015946JASPAR
Pax50.021454JASPAR

BED file downloads

Download top of 281 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 9633620-9633770snoU1334.59
chr3: 151063740-151063890MED12L41.06
chr2: 52040520-52040670CRYGGP45.67
chr10: 22291520-22291670DNAJC155.13
chr10: 22291520-22291670RN7SKP3755.13
chr10: 33483300-33483450NRP158.25
chr10: 33483300-33483450RP11-342D11.258.25
chr11: 102042980-102043130RP11-864G5.360.46
chr11: 102042980-102043130C11orf7060.46
chr2: 55329140-55329290RTN462.78
View top connections.

Other

CodePlot