SOM cluster: 1848

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2200
Promoter: 3%
CpG-Island: 3%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.0000000000012
Factore-val(match)DB
Tal1::Gata10.00000015183JASPAR
PPARG::RXRA0.00020987JASPAR
MZF1_1-40.0054235JASPAR
HNF4A0.006329JASPAR
SP10.012564JASPAR
Sites: 35/100 | e-val: 0.00000000064
Factore-val(match)DB
TP530.000057707JASPAR
PLAG10.0059746JASPAR
Klf40.01224JASPAR
Egr10.013408JASPAR
SRF0.021304JASPAR
Sites: 23/100 | e-val: 0.0056
Factore-val(match)DB
RXR::RAR_DR50.00005988JASPAR
PPARG0.00074091JASPAR
NR4A20.0017563JASPAR
Myf0.011024JASPAR
ZEB10.014772JASPAR
Sites: 23/100 | e-val: 0.61
Factore-val(match)DB
PPARG0.00024909JASPAR
SP10.00054136JASPAR
ESR20.0010996JASPAR
ESR10.0028536JASPAR
RXR::RAR_DR50.0033779JASPAR

BED file downloads

Download top of 2200 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 38798800-38798950SPINT232.2
chr19: 38798800-38798950C19orf3332.2
chr19: 38798800-38798950YIF1B32.2
chr19: 38798800-38798950PSMD832.2
chr7: 39605345-39605495AC004837.438.9
chr11: 67146545-67146695RAD9A39.78
chr11: 67146545-67146695TMEM13439.78
chr11: 67146545-67146695RPS6KB239.78
chr11: 67146545-67146695PPP1CA39.78
chr2: 122237985-122238135CLASP142.45
View top connections.

Other

CodePlot