SOM cluster: 1875

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 388
Promoter: 68%
CpG-Island: 3%
Conserved: 21%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 57/100 | e-val: 0.00000000000089
Factore-val(match)DB
MEF2A0.000054206JASPAR
Foxd30.00053387JASPAR
Foxq10.001615JASPAR
ARID3A0.0046587JASPAR
Nkx2-50.0062747JASPAR

BED file downloads

Download top of 388 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145398140-145398290ANKRD34A15.08
chr1: 198904380-198904530MIR181A1HG26.12
chr5: 118406060-118406210CTB-161M19.232.75
chr3: 150320685-150320835EIF2A38.21
chr3: 150320685-150320835SELT38.21
chr3: 150320685-150320835SERP138.21
chr3: 169489460-169489610MYNN38.73
chrX: 77155140-77155290COX7B50.33
chrX: 77155140-77155290ATP7A50.33
chr14: 32030285-32030435CTD-2213F21.453.65
View top connections.

Other

CodePlot