SOM cluster: 1888

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 14037
Promoter: 0%
CpG-Island: 0%
Conserved: 15%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.000038
Factore-val(match)DB
Foxa20.0000017878JASPAR
Foxq10.000014991JASPAR
Foxd30.00001756JASPAR
Lhx30.000030078JASPAR
FOXI10.00003212JASPAR

BED file downloads

Download top of 14037 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 124003280-124003430DERL137.72
chr8: 19556500-19556650RP11-1105O14.138.79
chr21: 41084280-41084430AF064860.542.47
chr7: 41724260-41724410INHBA44.4
chr17: 6548740-6548890MED3145.44
chr5: 67819200-67819350CTC-537E7.145.9
chr8: 10249245-10249395RNU6-729P46.4
chr12: 27960220-27960370KLHL4246.57
chr19: 10054000-10054150RDH846.65
chr16: 15978180-15978330RPL15P2047.21
View top connections.

Other

CodePlot