SOM cluster: 1909

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 29989
Promoter: 1%
CpG-Island: 0%
Conserved: 5%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.0000000000045
Factore-val(match)DB
Lhx30.000051552JASPAR
Foxd30.00048713JASPAR
ARID3A0.00092079JASPAR
Pax40.001269JASPAR
HNF1B0.0014098JASPAR

BED file downloads

Download top of 29989 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149953445-149953595OTUD7B16.23
chr3: 31879085-31879235ZNF587P137.24
chrX: 10027520-10027670WWC3-AS140.46
chr6: 41202725-41202875TREML440.76
chr20: 21255105-21255255PLK1S144.47
chr17: 61966025-61966175GH145.03
chr1: 147263745-147263895RP11-533N14.346.21
chr8: 90498980-90499130KRT8P447.44
chr2: 72266145-72266295CYP26B149.55
chrX: 47437525-47437675ARAF51.07
View top connections.

Other

CodePlot