SOM cluster: 191

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 80
Promoter: 22%
CpG-Island: 21%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 72/80 | e-val: 5.49996e-41
Factore-val(match)DB
SP10.000000000020029JASPAR
Pax40.00021761JASPAR
PLAG10.00096141JASPAR
RREB10.0014147JASPAR
Klf40.0043693JASPAR
Sites: 56/80 | e-val: 1.7e-19
Factore-val(match)DB
TFAP2A0.0077835JASPAR
Myf0.0081957JASPAR
TP530.029927JASPAR
NHLH10.11488JASPAR
ELK40.11673JASPAR
Sites: 31/80 | e-val: 0.00084
Factore-val(match)DB
SP10.000013146JASPAR
SPIB0.000086497JASPAR
EWSR1-FLI10.0005641JASPAR
Pax40.00091396JASPAR
SPI10.00095085JASPAR

BED file downloads

Download top of 80 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 38627680-38627830Y_RNA37.37
chr9: 117150280-117150430ORM157.16
chr9: 117150280-117150430RP11-9M16.257.16
chr9: 117150280-117150430DFNB3157.16
chr9: 117150280-117150430AKNA57.16
chr14: 24564800-24564950RP11-468E2.558.4
chr14: 24564800-24564950RP11-468E2.658.4
chr14: 24564800-24564950PCK258.4
chr2: 64834260-64834410AFTPH64.67
chr2: 64834260-64834410SERTAD264.67
View top connections.

Other

CodePlot