SOM cluster: 1944

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 753
Promoter: 1%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.0000000000033
Factore-val(match)DB
Lhx30.00054006JASPAR
HNF1A0.0028021JASPAR
Pax40.016878JASPAR
HNF1B0.020139JASPAR
NR3C10.022297JASPAR
Sites: 25/100 | e-val: 0.00003
Factore-val(match)DB
Foxq10.00037777JASPAR
Foxd30.00050961JASPAR
Pax40.0021195JASPAR
Lhx30.0055456JASPAR
NR1H2::RXRA0.0076129JASPAR

BED file downloads

Download top of 753 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 130691800-130691950FNIP137.96
chr5: 130691800-130691950RAPGEF637.96
chr12: 104309240-104309390GLT8D239.41
chr12: 104686920-104687070TXNRD143.99
chr12: 104686920-104687070EID343.99
chr1: 196357040-196357190KCNT244.13
chr5: 78120680-78120830ARSB50.09
chr3: 158421480-158421630RP11-379F4.450.11
chr3: 158421480-158421630LXN50.11
chr3: 158421480-158421630RARRES150.11
View top connections.

Other

CodePlot