SOM cluster: 195

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 251
Promoter: 72%
CpG-Island: 73%
Conserved: 85%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 20/100 | e-val: 1.7e-29
Factore-val(match)DB
znf1430.000000017288JASPAR
RELA0.0018564JASPAR
Myb0.0052634JASPAR
Stat30.0083751JASPAR
Pax40.0095061JASPAR
Sites: 86/100 | e-val: 0.000000000000028
Factore-val(match)DB
SP10.0000010042JASPAR
Klf40.00017683JASPAR
E2F10.011932JASPAR
TFAP2A0.063294JASPAR
Egr10.077443JASPAR

BED file downloads

Download top of 251 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 120966900-120967050RPL11P540.58
chr13: 53191500-53191650SUGT145.07
chr6: 28806760-28806910NOL5BP45.83
chr6: 28806760-28806910TRIM2745.83
chr6: 28806760-28806910RNU6-930P45.83
chr6: 28806760-28806910XXbac-BPG308K3.645.83
chr15: 91565800-91565950VPS33B46.58
chr15: 91565800-91565950HDDC346.58
chr15: 91565800-91565950PRC146.58
chr15: 91565800-91565950PRC1-AS146.58
View top connections.

Other

CodePlot