SOM cluster: 1955

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 12534
Promoter: 3%
CpG-Island: 0%
Conserved: 17%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 9.2e-25
Factore-val(match)DB
MEF2A0.0024237JASPAR
Lhx30.0058403JASPAR
Foxd30.0080175JASPAR
SRF0.019504JASPAR
Foxq10.020739JASPAR

BED file downloads

Download top of 12534 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 133657765-133657915ABL126.67
chr1: 145563305-145563455ANKRD3530.23
chr12: 119622265-119622415HSPB831.08
chr7: 112629720-112629870C7orf6032.92
chr7: 112629720-112629870AC018464.332.92
chr6: 39818540-39818690DAAM233.13
chr6: 39818540-39818690RP11-61I13.333.13
chr19: 34783280-34783430LSM14A38.12
chr8: 37378220-37378370RP11-150O12.238.96
chr6: 1346980-1347130FOXF240.95
View top connections.

Other

CodePlot