SOM cluster: 198

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 320
Promoter: 78%
CpG-Island: 80%
Conserved: 87%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 1.2e-18
Factore-val(match)DB
TFAP2A0.00030738JASPAR
NHLH10.00035974JASPAR
SP10.0010396JASPAR
E2F10.048051JASPAR
Egr10.05618JASPAR

BED file downloads

Download top of 320 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149860020-149860170SF3B418.53
chr1: 149860020-149860170HIST2H2AB18.53
chr1: 150533560-150533710TARS223.85
chr1: 150533560-150533710ADAMTSL423.85
chr1: 150533560-150533710MCL123.85
chr19: 19431480-19431630TM6SF250.04
chr17: 48450480-48450630EME152.34
chr1: 207224340-207224490C4BPA55.31
chr1: 207224340-207224490YOD155.31
chr11: 62439040-62439190METTL1257.37
View top connections.

Other

CodePlot