SOM cluster: 200

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 178
Promoter: 52%
CpG-Island: 39%
Conserved: 87%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 4.1e-34
Factore-val(match)DB
SP10.00000015253JASPAR
Egr10.0025886JASPAR
PLAG10.0026148JASPAR
MZF1_5-130.0058633JASPAR
EWSR1-FLI10.0084976JASPAR
Sites: 50/100 | e-val: 0.000031
Factore-val(match)DB
SP10.0000000097768JASPAR
Klf40.0021319JASPAR
Tal1::Gata10.0037559JASPAR
Egr10.0073044JASPAR
Myf0.018329JASPAR
Sites: 38/100 | e-val: 0.000018
Factore-val(match)DB
SP10.0000090227JASPAR
RXR::RAR_DR50.00045424JASPAR
TFAP2A0.0041325JASPAR
EWSR1-FLI10.013634JASPAR
Pax40.018751JASPAR
Sites: 21/100 | e-val: 0.00056
Factore-val(match)DB
AP10.00000000058804JASPAR
NFE2L20.0000000051721JASPAR
PPARG0.00087133JASPAR
Pax20.0032762JASPAR
NFE2L1::MafG0.0057743JASPAR

BED file downloads

Download top of 178 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 49350320-49350470RND146.74
chr9: 115819020-115819170ZNF88351.63
chr1: 67391100-67391250MIER153.46
chr1: 27024760-27024910ARID1A59.01
chr14: 55518060-55518210AL160471.659.51
chr11: 62323685-62323835MIR365459.94
chr11: 62323685-62323835AHNAK59.94
chr11: 62323685-62323835TUT159.94
chr11: 62323685-62323835RP11-831H9.1159.94
chr11: 62323685-62323835GANAB59.94
View top connections.

Other

CodePlot