SOM cluster: 2006

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 44090
Promoter: 1%
CpG-Island: 0%
Conserved: 13%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 3.5e-17
Factore-val(match)DB
HNF1A0.000053115JASPAR
Lhx30.00011515JASPAR
HNF1B0.0018295JASPAR
Prrx20.0040572JASPAR
Evi10.005972JASPAR
Sites: 24/100 | e-val: 0.99
Factore-val(match)DB
Foxq10.00042134JASPAR
Prrx20.00069852JASPAR
Lhx30.001737JASPAR
MEF2A0.0018787JASPAR
NKX3-10.0019544JASPAR

BED file downloads

Download top of 44090 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150297445-150297595APH1A18.06
chr8: 101493945-101494095KB-1615E4.331.28
chr1: 91937020-91937170RP11-47K11.231.47
chr5: 132231845-132231995AC010240.338.04
chr8: 124334485-124334635IMPDH1P640.18
chr1: 92532785-92532935PRKAR1AP41.04
chr17: 12662685-12662835MYOCD43.16
chr4: 178138285-178138435RN7SKP13644.14
chr2: 159518725-159518875PKP444.81
chr3: 160230845-160230995SMC445.55
View top connections.

Other

CodePlot