SOM cluster: 202

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 255
Promoter: 6%
CpG-Island: 11%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 0
Factore-val(match)DB
CTCF9.992e-16JASPAR
INSM10.0000034242JASPAR
SP10.00013759JASPAR
Zfp4230.00113JASPAR
PLAG10.010025JASPAR
Sites: 45/100 | e-val: 0.11
Factore-val(match)DB
SP10.0000011922JASPAR
Tal1::Gata10.000084123JASPAR
Klf40.00029129JASPAR
MZF1_5-130.00056339JASPAR
Pax40.0021919JASPAR
Sites: 24/100 | e-val: 0.066
Factore-val(match)DB
Hand1::Tcfe2a0.0029609JASPAR
T0.00868JASPAR
INSM10.0094276JASPAR
TLX1::NFIC0.010339JASPAR
TFAP2A0.01291JASPAR

BED file downloads

Download top of 255 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 120556305-120556455PXN-AS134.71
chr12: 120556305-120556455GCN1L134.71
chr2: 119992300-119992450STEAP3-AS140.41
chr1: 203009360-203009510CYB5R144.64
chr1: 203009360-203009510RP11-38O14.544.64
chr11: 69476885-69477035FGF1947.12
chr7: 139190480-139190630RP4-701O16.547.51
chr9: 109622320-109622470ZNF46248.06
chr9: 109622320-109622470RP11-508N12.448.06
chr6: 30415160-30415310HCG19P54.42
View top connections.

Other

CodePlot