SOM cluster: 2060

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 6219
Promoter: 1%
CpG-Island: 0%
Conserved: 17%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 11/100 | e-val: 0.0034
Factore-val(match)DB
Foxd30.000048883JASPAR
FOXI10.00089175JASPAR
IRF10.005948JASPAR
FOXA10.0064601JASPAR
Foxq10.0094767JASPAR

BED file downloads

Download top of 6219 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 91239480-91239630RP4-665J23.120.57
chr1: 91239480-91239630BARHL220.57
chr1: 149914840-149914990SF3B431.04
chr10: 13690540-13690690PRPF1832.73
chr10: 13690540-13690690RP11-295P9.332.73
chr1: 180915300-180915450RP11-46A10.538.53
chr1: 180915300-180915450STX638.53
chr16: 74416520-74416670NPIPB1538.96
chr1: 198928645-198928795RP11-16L9.339.48
chr2: 136348620-136348770R3HDM140.65
View top connections.

Other

CodePlot