SOM cluster: 2078

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 353
Promoter: 8%
CpG-Island: 0%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.000000000000001
Factore-val(match)DB
HNF1A0JASPAR
HNF1B6.6613e-16JASPAR
Lhx30.00000064032JASPAR
Prrx20.000088546JASPAR
NKX3-10.00039918JASPAR
Sites: 32/100 | e-val: 0.00000000043
Factore-val(match)DB
Foxd30.000000000019408JASPAR
FOXA10.000000000029727JASPAR
FOXI10.0000000011189JASPAR
Foxa20.000000030779JASPAR
Foxq10.000079483JASPAR
Sites: 19/100 | e-val: 0.15
Factore-val(match)DB
MEF2A0.0014237JASPAR
NFIL30.0018693JASPAR
ARID3A0.003342JASPAR
HNF1B0.008855JASPAR
NKX3-10.010646JASPAR

BED file downloads

Download top of 353 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 35486540-35486690GRAMD1A41.7
chr11: 13064540-13064690RASSF1046.1
chr1: 150640440-150640590HORMAD146.54
chr3: 31245625-31245775AC115283.150.15
chr11: 57209480-57209630RP11-872D17.855.01
chr11: 57209480-57209630SLC43A355.01
chr2: 165567540-165567690GRB1457.19
chr11: 27423640-27423790LGR458.02
chr3: 12263305-12263455PPARG58.49
chr8: 17764880-17765030RP11-156K13.159.09
View top connections.

Other

CodePlot