SOM cluster: 2142

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1960
Promoter: 2%
CpG-Island: 13%
Conserved: 19%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.0000000000049
Factore-val(match)DB
Tcfcp2l10.001635JASPAR
BRCA10.0018305JASPAR
SP10.016213JASPAR
E2F10.030785JASPAR
ZNF354C0.036798JASPAR

BED file downloads

Download top of 1960 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151033460-151033610MLLT1124.74
chr1: 151033460-151033610RP11-316M1.324.74
chr17: 73585905-73586055SAP30BP42.85
chr3: 31771325-31771475ZNF587P145.94
chrX: 51075040-51075190NUDT1046.7
chrX: 51075040-51075190CXorf6746.7
chr1: 145683545-145683695RNF11547.88
chr17: 62045440-62045590GH249.55
chr17: 62045440-62045590CSH249.55
chr22: 20789285-20789435Y_RNA53.08
View top connections.

Other

CodePlot